Insertion junction: CLIP2.007169_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007169
Chromosome:chromosome 9
Location:2585110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGCCTCGCGGTTCCGCCCATAGGAATAGTCGGTTCCGCGACATGTAT
Internal bar code:TTTCGTTATATCAAGTGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1710
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGGCCCACCATTGATT
Suggested primer 2:GTCAGAGCAAGTGGATGGCT