Insertion junction: CLIP2.007179_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007179
Chromosome:chromosome 12
Location:6938856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g561500 3'UTR
Cre12.g561550 CDS1 Mitochondrial half-size ABC transporter, membrane protein; (1 of 2) K05661 - ATP-binding cassette, subfamily B (MDR/TAP), member 6 (ABCB6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCCCATGCATGCGGTTCGTGAGCGTTGGTGCCGTGAGGGGGACATGC
Internal bar code:TGAGCGCGAGGGAAGACGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGCTGGTAGTTTGCTGA
Suggested primer 2:CGAGAAGCTTCGCTGTCAGA