Insertion junction: CLIP2.007182_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007182
Chromosome:chromosome 3
Location:5990560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189450 (1 of 2) PTHR22769//PTHR22769:SF33 - MUTT/NUDIX HYDROLASE // NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 17 3'UTR
Cre03.g189500 (1 of 3) K03574 - 8-oxo-dGTP diphosphatase [EC:3.6.1.55] (mutT, NUDT15, MTH2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAAGCTTCGCCCCTTCGCACTACAAGGTGAACTCCCCACCCACCCCCT
Internal bar code:AGTTCAAAGACAAGCACGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2125
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGAACCCAGGCCAGTAT
Suggested primer 2:TATGGCCGCATGATGCAGAT