Insertion junction: CLIP2.007195_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007195
Chromosome:chromosome 3
Location:1975311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155600 (1 of 2) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATGACGGAATGGCCTCGCACGCGGGCGCGCAAGACCCGGGCCAACG
Internal bar code:AGGACCGATGGTAAGAGATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1463
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACGGAGAAAGTCACAGG
Suggested primer 2:AGTTCTCAACACGACGGGAC