Insertion junction: CLIP2.007204_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007204
Chromosome:chromosome 2
Location:1912407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087700 APX1 (1 of 1) PTHR31356//PTHR31356:SF1 - FAMILY NOT NAMED // L-ASCORBATE PEROXIDASE S, CHLOROPLASTIC/MITOCHONDRIAL-RELATED; Ascorbate peroxidase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAACCCCAGAGCTCCCCTCCATTCCCGTGCTACGGTGCCACTCGCA
Internal bar code:GATACCCTAAACGACTCATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2033
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGGTTCAGAATGGCCAG
Suggested primer 2:ACGAAGCAATTGTTGTCGGC