Insertion junction: CLIP2.007216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007216
Chromosome:chromosome 6
Location:8675776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310050 CPL13 Conserved in the Plant Lineage; (1 of 1) PTHR10794//PTHR10794:SF53 - ABHYDROLASE DOMAIN-CONTAINING PROTEIN // CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 3'UTR
Cre06.g310100 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCACTCGCGGTGACCAGGTCCGGATATCGGGTGTTGCGTGTCGGTG
Internal bar code:ACATGTTTTGCGGATTCGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2958
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGGTCTGCGGTACATG
Suggested primer 2:GACGCAGCCAACATTGTTGT