Insertion junction: CLIP2.007220_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007220
Chromosome:chromosome 1
Location:3453396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022400 (1 of 77) IPR001623 - DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCATAATCGGCTACAATTAATTAAGATAACGAGCCTAGTTGTTGGTA
Internal bar code:TTTAGAATGCTCGAAATATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCACACGCCTCTCAAC
Suggested primer 2:CTCCGGTATGCTCAGACCAC