Insertion junction: CLIP2.007220_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007220
Chromosome:chromosome 1
Location:3453399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022400 (1 of 77) IPR001623 - DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGTAAACAAGAATGAGTGCAAGTGTAATTTTGAAACTTGCAGGAGA
Internal bar code:TGATGCCCTGGTTCCTTTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3051
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGGTATGCTCAGACCAC
Suggested primer 2:TGTCTCACACGCCTCTCAAC