Insertion junction: CLIP2.007226_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007226
Chromosome:chromosome 6
Location:4832130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280150 PSBP9 PsbP-like protein of thylakoid lumen; (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGGCATGTCCGTTCGTAACCTGTACACCTTTGCCACTGCCTATCACC
Internal bar code:ATTGGGATGAATATGGGAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1438
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCTGCCCCTACACTATG
Suggested primer 2:CGCGACACATTTAAGGCTCG