Insertion junction: CLIP2.007250_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007250
Chromosome:chromosome 6
Location:6146276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291650 FDX11 (1 of 1) PTHR23426//PTHR23426:SF32 - FERREDOXIN/ADRENODOXIN // 2FE-2S IRON-SULFUR CLUSTER BINDING DOMAIN-CONTAINING PROTEIN; 2Fe-2S ferredoxin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTATTCACTGTTATCGCTAATAGTCATCTAGTTAGCTCCAATAAAAAA
Internal bar code:ATACTGTCTTCACTTGAACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3476
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCTCAAAGCAGGTCAG
Suggested primer 2:TCATCCTCGCGATACTGCAC