Insertion junction: CLIP2.007252_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007252
Chromosome:chromosome 12
Location:49540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483600 (1 of 1) PTHR24198//PTHR24198:SF93 - ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre12.g483650 STL1 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Ser-Thr protein kinase, paralog of STT7 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCTTATGGCTTCTTACGAGTCACCACACATTCCGAGCGGTGGGCTGG
Internal bar code:AGTCAACTCTGAGAACGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2405
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGTCCCCACTGGAGGTC
Suggested primer 2:GAGTATTACGGACCGGGCTG