Insertion junction: CLIP2.007254_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007254
Chromosome:chromosome 7
Location:3246805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334250 (1 of 6) PTHR12197//PTHR12197:SF138 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGACCACCCGTCTCACGCATCACGTAAACTGCCTAGCGGTCAGCGCTA
Internal bar code:GGAGGTGCGCCGCTGTAGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTGCAGATTTCATGCC
Suggested primer 2:CGTCCAGGAGTGCTCAAGTT