Insertion junction: CLIP2.007263_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007263
Chromosome:chromosome 5
Location:1579138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234750 CGLD25 Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGAAGTACTCGGCCCAGGCCGGGCCGCCCGCCGTCACCGCCATGCC
Internal bar code:GTCTGCCTGATATTAATTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4829
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGTCTTTGTGGGCTTAT
Suggested primer 2:ACGGAGTCGGCTTATGCAAA