Insertion junction: CLIP2.007273_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007273
Chromosome:chromosome 10
Location:3404404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443950 (1 of 2) PF04564//PF05049 - U-box domain (U-box) // Interferon-inducible GTPase (IIGP) (IIGP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACAGCGGGCGCCAGGAGGGGGAGGGCCTGCTGGGCTTGTACGAGTTC
Internal bar code:TTCCGTAAGCGGAGATGAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4352
LEAP-Seq percent confirming:98.8235
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTGCGGAAAAAGCAAGG
Suggested primer 2:GCTGCGCTCTGTATTGTTCG