Insertion junction: CLIP2.007273_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007273
Chromosome:chromosome 10
Location:3404417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443950 (1 of 2) PF04564//PF05049 - U-box domain (U-box) // Interferon-inducible GTPase (IIGP) (IIGP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTCAGGGCCATGGCGCTCAGCAGGAAGTAATCCACCGACCGGTCGC
Internal bar code:GGAGTCATCGCATGACGGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5045
LEAP-Seq percent confirming:85.7988
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:169

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCGCTCTGTATTGTTCG
Suggested primer 2:TTCGTGCGGAAAAAGCAAGG