Insertion junction: CLIP2.007286_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007286
Chromosome:chromosome 10
Location:5628676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458700 (1 of 6) PF07719//PF13414 - Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGGGATGGGCTACCAGGTTTCCATTCTGCTTGCAGCGATCGTGTG
Internal bar code:AGTCCTTACTTACGTACGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4252
LEAP-Seq percent confirming:84.4444
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAAACAGGCCATAGCTG
Suggested primer 2:AGGCTGGCGCTTTAGAACAT