Insertion junction: CLIP2.007296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007296
Chromosome:chromosome 3
Location:4194648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATCCAATAGCCGCGGCAGCGGTGTGGCGGCGGCGGCCGCGGCGGCT
Internal bar code:CTGGGTATCACAGGCGCCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:910
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTAGTCGCAGTGTCCTGA
Suggested primer 2:AAGTTCACACAGCCCACACA