Insertion junction: CLIP2.007296_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007296
Chromosome:chromosome 3
Location:4194649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACGACGCCCATCCTGGACTGGTCCATGAACGAGCTGCCTAACGACTA
Internal bar code:TTTTCTTAACGTTATAAGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTCACACAGCCCACACA
Suggested primer 2:TCCTAGTCGCAGTGTCCTGA