Insertion junction: CLIP2.007318_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007318
Chromosome:chromosome 16
Location:2423714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659850 CGL37 conserved protein related to shikimate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTCCTCATTGCTTGTTTCTTCTCTTCCCAATGCTACTTCCAACCTT
Internal bar code:TACTATGCGTCTCTCGTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1331
LEAP-Seq percent confirming:56.7568
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCTTCTACTGCTCCTG
Suggested primer 2:AATGCTGACTGGGATGTGCA