Insertion junction: CLIP2.007328_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007328
Chromosome:chromosome 10
Location:1710984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429880 CGL156 DNA binding protein; (1 of 1) IPR001606//IPR001965//IPR003754//IPR011011//IPR019787 - ARID DNA-binding domain // Zinc finger, PHD-type // Tetrapyrrole biosynthesis, uroporphyrinogen III synthase // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACCTGTAAAAAAGTAGAACGCATCGATCTGGCCGTCGGCGTGGAGC
Internal bar code:GACCCCGTGACATGGCCCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGCTGAAAACCCCGTG
Suggested primer 2:GTGACATAACGCCAGGGGAA