Insertion junction: CLIP2.007328_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007328
Chromosome:chromosome 10
Location:1710987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429880 CGL156 DNA binding protein; (1 of 1) IPR001606//IPR001965//IPR003754//IPR011011//IPR019787 - ARID DNA-binding domain // Zinc finger, PHD-type // Tetrapyrrole biosynthesis, uroporphyrinogen III synthase // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCAAGGGCTTTTCCATACAGGGTGTGCACTGAAGCTAGGATGGTC
Internal bar code:GACCCCGTGACATGGCCCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACATAACGCCAGGGGAA
Suggested primer 2:CCAAAGCTGAAAACCCCGTG