Insertion junction: CLIP2.007336_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007336
Chromosome:chromosome 5
Location:810079
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g245900 BCA2 (1 of 1) PTHR11825//PTHR11825:SF46 - SUBGROUP IIII AMINOTRANSFERASE // BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 3, CHLOROPLASTIC; Branched-chain amino acid aminotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATTGCCTCCCCTTCCCCACTGCCCCTCCCCACTGCTACTGCCCCTCC
Internal bar code:TGCGTTCAGTTTTATGTTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCATGGAGGTATGAGC
Suggested primer 2:TGTTCCCCACGCTTTCCTAC