Insertion junction: CLIP2.007339_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007339
Chromosome:chromosome 8
Location:846697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361250 (1 of 7) 2.4.1.255 - Protein O-GlcNAc transferase / OGTase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCATAGTGCACTGAGAGTTGGCGACGGCAGAAAGGGATGGGCATGTT
Internal bar code:GTACAAGACCCTTGGATTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:88
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCCACCTACACCTACAC
Suggested primer 2:ATACCTGGCTTGCCACCTTC