Insertion junction: CLIP2.007350_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007350
Chromosome:chromosome 3
Location:3812239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169900 (1 of 4) IPR023222 - PsbQ-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGGACTACCAGCAGTACTTCGACAGGTGCGTGCAATTCTACTAAAA
Internal bar code:TTGTATAGTTTAGCTAATCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3583
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCCCAGTCTACCAAAT
Suggested primer 2:CATCTGGGTTGGGGCTTGAT