Insertion junction: CLIP2.007358_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007358
Chromosome:chromosome 14
Location:855525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGGTCGGGGTGGATTGCTGTGCAGTGCACGCACGCCCGAACGCTGT
Internal bar code:CTGAAGAATGGATTTGGCCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1249
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGTCGTGTTGAGTTTT
Suggested primer 2:GAGCGCATGTGCCATTAAGG