Insertion junction: CLIP2.007373_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007373
Chromosome:chromosome 3
Location:2554144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159851 (1 of 2) IPR001623//IPR002110//IPR020683 - DnaJ domain // Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACGCCGTGGGTTACTGCCCGCGGGTGCCCGCGCCTGGCAGCAGTCGG
Internal bar code:TTTGATGGTATGCTGCTCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3045
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTTATGCCTGCCATGC
Suggested primer 2:GCAATACATCAGCAGCCTGC