Insertion junction: CLIP2.007376_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007376
Chromosome:chromosome 13
Location:2938583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583600 DGD1 Digalactosyldiacylglycerol synthase; (1 of 1) 2.4.1.241 - Digalactosyldiacylglycerol synthase / UDP-galactose:MGDG galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCCTCACAGGGCATACGTCCCCAAATGTGGGCCAGCACGTCACTGG
Internal bar code:TAATGGCCAGACTGGGAGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1265
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTAACGGTGCCTCTTG
Suggested primer 2:CGCCCTTAACCGTCTCCTTT