Insertion junction: CLIP2.007387_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007387
Chromosome:chromosome 6
Location:3514493
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g278117 CPLD7 Conserved in the Plant Lineage and Diatoms; (1 of 98) IPR023214 - HAD-like domain 3'UTR
Cre06.g278118 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTAACATAGTCCATGTCGAGTCCTACCATCAGCCTCATCCCCACAC
Internal bar code:TATGGGTCGGGCGAACCTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTGTACGCGTGTGTGGT
Suggested primer 2:ACTTACAGCAACCTCCTCGC