Insertion junction: CLIP2.007405_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007405
Chromosome:chromosome 14
Location:2496005
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g624350 VTE6 Tocopherol O-methyltransferase; (1 of 1) K18534 - MPBQ/MSBQ methyltransferase (K18534) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCTTCAGATTCAGCCGCTCGCCGAGTCGCCGTCAAATTGTCGTACAC
Internal bar code:TCCGCTAACTAAGATTATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCGGACCCACCTCTAAT
Suggested primer 2:GGAACTCCGGGGCGTTATAG