Insertion junction: CLIP2.007409_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007409
Chromosome:chromosome 13
Location:4257618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592050 DAL1 Allantoinase; (1 of 1) 3.5.2.5 - Allantoinase intron
Cre13.g592100 (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAACGCGGCAAGAGCATATGACAGGTTAGCAACGCCAAATGCACGCAC
Internal bar code:TAGATAGCATGCCGGGTAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1961
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGGAGTGTGCAGGGTTA
Suggested primer 2:AACACCCGACATCCCAATCC