Insertion junction: CLIP2.007410_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007410
Chromosome:chromosome 6
Location:4902243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280650 CGL59,Y3IP1 Chloroplast Ycf3 interacting protein involved in Photosystem I biogensis 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATTGGAGTGGGAGGCCCTTCCCGGTTGAACGCGATGAAGCGTGCATG
Internal bar code:TGACCGAGATACGCTATGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAACAATGCTTGCAGAA
Suggested primer 2:CCTCAAAAATGTCCGCGCAA