Insertion junction: CLIP2.007415_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007415
Chromosome:chromosome 14
Location:850017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATCATGCATGCAGGCAACACAGCTAGCAAGACAGGTAGGGGCCCCT
Internal bar code:GGTCTACGTGAGTTCCGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1130
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGCTGCTTCCTCAAGT
Suggested primer 2:TCGGATCTCGGAAGTGGAGT