Insertion junction: CLIP2.007415_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007415
Chromosome:chromosome 14
Location:850022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTTCCTCCAGCCGCCACCTGCACGCGCCTGGCCCTGCCCCCGCTCCA
Internal bar code:GGTCTACGTGAGTTCCGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGATCTCGGAAGTGGAGT
Suggested primer 2:GTACGGCTGCTTCCTCAAGT