Insertion junction: CLIP2.007426_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007426
Chromosome:chromosome 2
Location:2554212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092550 TPR1 (1 of 1) 6.2.1.4 - Succinate--CoA ligase (GDP-forming) / Succinyl-CoA synthetase (GDP-forming); Tetratricopeptide-repeat protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGTCCTTGGCCGGCCAACTACACCCCACATAGACCGACTCAACCTG
Internal bar code:TGGAGCTTAAGGGCCAGGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3835
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGCGGCAGAGATGATGA
Suggested primer 2:TAGGCAGCTGGATGTGGTTG