Insertion junction: CLIP2.007432_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007432
Chromosome:chromosome 5
Location:2408737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238500 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGCTAGCCACCGGCGGCAAGCCGATGTGCGGCTGAATGTCCAGCG
Internal bar code:ATTTCTGTATGTTAGCATTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1122
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACGCCCTTCCCTTGTTG
Suggested primer 2:CTGTGTGTGCAGCTTTGGAC