Insertion junction: CLIP2.007434_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007434
Chromosome:chromosome 13
Location:1565981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573000 E2FR1 (1 of 2) PTHR13271//PTHR13271:SF44 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE SMALL SUBUNIT N-METHYLTRANSFERASE I-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGAGCCTCCACTGCGACCGCCGGCAACAACATGCCGCCGCCACGTCA
Internal bar code:AACCTTTCCACATGAAGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCGCGATGTCACAGCAG
Suggested primer 2:AATCCCAACCTGCCGATCAG