Insertion junction: CLIP2.007450_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007450
Chromosome:chromosome 7
Location:4021566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340200 TEF3,PGRL1 Proton-gradient related-like; (1 of 1) PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCAGCAGGTGGTCGTGCAGACCATCATGACCGCTTGGAACGCGTGCC
Internal bar code:GATGGAGGTCATGTCGGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5098
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACGAGGACTACGATGCC
Suggested primer 2:AGTTCCGCACACGACTTCAT