Insertion junction: CLIP2.007455_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007455
Chromosome:chromosome 6
Location:1610386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261500 CPLD58 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR11260:SF136 - THIOREDOXIN FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACAAGCCCAAGCCAACCACTCAAGGATGATTCGTCGCCCAGCGCCAC
Internal bar code:AGCTAATTTACCGGTTCACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1974
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGGAAGAATCGATGGAG
Suggested primer 2:ACGATCAATTAACGCGTGCG