Insertion junction: CLIP2.007477_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007477
Chromosome:chromosome 6
Location:1636670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261850 5'UTR
Cre06.g261900 FAP71 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 71 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGTCACTCCTTGCATACACTATTGAAAGGGAAAATCCACAGCACCT
Internal bar code:GAGGGTTAGACATAGGATAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1507
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGAGAGGTTGACACAGA
Suggested primer 2:CAGTATGATGCGCGTGTGTG