Insertion junction: CLIP2.007481_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007481
Chromosome:chromosome 8
Location:2489094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372450 PSBQ1,OEE3, PSBQ (1 of 1) K08901 - photosystem II oxygen-evolving enhancer protein 3 (psbQ); Photosystem II Oxygen Evolution Enhancer protein 3 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGTCATTCTGGAGATGTGAACACGCCATGCAGTGCTGCGGAATAGG
Internal bar code:TAATTGGTGGTGCCAGGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2544
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACCCTGTCCCATCAC
Suggested primer 2:TGACTGTCGTGTCAACTCGG