Insertion junction: CLIP2.007484_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007484
Chromosome:chromosome 5
Location:910960
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g246551 (1 of 1) IPR000104//IPR001810//IPR020683 - Antifreeze protein, type I // F-box domain // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCATGCGTGCCCATACATCACATTGGAGTGGGAGTCACTTATTCACC
Internal bar code:ATTGCTCTTGAAGTAATTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGGGTTAAATTGCTTGC
Suggested primer 2:CACTCACACTGTCACCTCCC