Insertion junction: CLIP2.007486_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007486
Chromosome:chromosome 3
Location:1563340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAATGCAGGTCAGGGCGGCCAGGGAGGGCGGGGGGAAGGTGAAGGCA
Internal bar code:AGAGCCGTTGGTGCTGGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1929
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAGTCGCACGAGGCTAC
Suggested primer 2:CGCATGCACTGTGGCTTATC