Insertion junction: CLIP2.007489_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007489
Chromosome:chromosome 3
Location:5197727
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g181500 DPE1,STA11 Disproportionating enzyme 1; (1 of 1) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTAACACGGCTGCTCAATCACGCTGCTCCATCTTGTGTCCCGCATTGC
Internal bar code:GCACCGTGGCGAAAGAAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGGGACTCGTGCTGCAC
Suggested primer 2:CCTTGTACCGTTCCGTGTCA