Insertion junction: CLIP2.007499_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007499
Chromosome:chromosome 12
Location:7264855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558550 CPLD60 (1 of 1) PTHR10992:SF351 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN; possible hydrolase 5'UTR
Cre12.g558600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAAGAGAAGAAAAGTTTAGTGCAACTCCGTTACAGCCAGTTACATAT
Internal bar code:CACGATCCCATATGGACCCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:199
LEAP-Seq percent confirming:21.2121
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCGATGCGGGCTGAGTA
Suggested primer 2:ACTGACCCCCAGCCATAGAT