Insertion junction: CLIP2.007503_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007503
Chromosome:plastome
Location:192916
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802334 orf528 unknown ORF CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTTAAAAAAGTGTGACATACTTCTTTTATTTTACTAAACTTAAAAAA
Internal bar code:TCGTTTAACCACAGGAGGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTTCGTTGGAGCTTCT
Suggested primer 2:CGCACGAGGCAGCATTAAAA