Insertion junction: CLIP2.007504_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007504
Chromosome:chromosome 13
Location:1959256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576350 PFP2 Prefoldin-family protein; (1 of 1) K17560 - unconventional prefoldin RPB5 interactor 1 (URI1) 3'UTR
Cre13.g576400 ADCL1,BCA4 aminotransferase related to 4-amino-4-deoxychorismate lyase; (1 of 1) 2.6.1.21//4.1.3.38 - D-amino-acid transaminase / D-aspartic aminotransferase // Aminodeoxychorismate lyase / Enzyme X 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACTGCTCCCGCCGTCGCGCGCGTTCCATCCATCGTCGCGCGCGTTCC
Internal bar code:GTCTACTTAGATAGTTTTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGAAAGCCACTGTGAC
Suggested primer 2:CCCATGTGGCTGCTGTAGAA