Insertion junction: CLIP2.007506_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007506
Chromosome:chromosome 13
Location:3883809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589650 (1 of 1) PF08424 - NRDE-2, necessary for RNA interference (NRDE-2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTACATGCATGCACGCTCTCAGCCTGCAGGCGTGGCGCGTGCACTGT
Internal bar code:TCACACAGGACCGGCAGGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAGAAAGCGGGCTGAGGG
Suggested primer 2:CGGGAGTACAACACAGCAGT