Insertion junction: CLIP2.007512_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007512
Chromosome:chromosome 10
Location:2815856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438850 ROC76 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR
Cre10.g438883 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTATAGCATTGTCTGCGGCTCGCTGGCAGCGCCTGGCGTGCCGGGAG
Internal bar code:GGCCGGCACTCATCTCCACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2334
LEAP-Seq percent confirming:98.8372
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGCACCGAAACCCTAA
Suggested primer 2:GCAAGCCCTTGTGCTGTTAC