Insertion junction: CLIP2.007534_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007534
Chromosome:chromosome 7
Location:1701563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGGTGTGTGAGAATCGCACCCGATCGCCCAAGCATTATGCATGTTC
Internal bar code:GTATTTTTGCATCGGTATCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4658
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCACATTCGTGCTATGC
Suggested primer 2:CTCGGCACCTTACCCGTATC