Insertion junction: CLIP2.007534_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007534
Chromosome:chromosome 12
Location:304118
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGGGAGAGAGTGGGAGGAGAGGGGAGAGAGAGGGAAAGCGAGGGGG
Internal bar code:CAAGAGTGTCGCCTTTTGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCTACAACCCCTCCCCC
Suggested primer 2:ACGTGGCTAGGGTTAAAGGC